junjunlab / biosequtils Goto Github PK

按照我的理解，注释文件应该是跟着R包一起安装进来的吧。。。但是无法本地读取。。我是不是应该自己去网站下载呢。。。

Hello,
Thanks for your R package. It's very useful.

when I write
trackVisProMax(Input_gtf = gtf, Input_bw = bw, query_region = list(query_chr=c('6','18'), query_start=c(85100000,82400000), query_end=c(85200000,82500000)), trans_topN = 1, add_gene_label_layer = T, sample_fill_col = c('#d7191c','#d7191c','#2c7bb6','#2c7bb6'), signal_range_label_params = list(size=2) )

It shows:
Error in data.frame(seqnames = NA, start = NA, end = NA, score = NA, fileName = rep(add_facet_name, : arguments imply differing number of rows: 1, 0
Why?
when I use inputgene,like this(Input_gene = c('Tfap2c','Neurog1')), it works well.

I got an error when running getIntronInfo and getPromoters. I used the lastest version gtf and fasta of UCSC.

These genes are present in the gtf file.

俊俊哥，怎么改最下面那个转录本框的高度，默认的太窄了，用哪个参数呢？有的基因转录本太多，展示所有的话和上面的字符信息叠在一起了就，效果理想。
Y轴样式能改成刻度线那种吗？ 之前的 trackVi函数的参数能整过来吗？ 非常感谢

还有下面一个小bug 文档应该改下