emreg00 / guild Goto Github PK

Dear all,

My name is Jordi Valls, and I'm trying to execute the python script create_random_networks_for_netzcore.py from NetZcore module of GUILD.

I try to execute GUILD following the tutorial of README:

python3 src/create_random_networks_for_netzcore.py data/test_interactions.txt 100

Unfortunately it breaks giving me the following error:

File "src/create_random_networks_for_netzcore.py", line 32
g_sampled = randomize_graph(graph=g, randomization_type="preserve_topology_and_node_degree")
^
TabError: inconsistent use of tabs and spaces in indentation

Could you help me to fix this error?? In addition, when I execute Guild with -s z, without -x value it works....

So could you tell me the importance of X parameter??

Thanks for your help!

Jordi

Hi Emre, my name is Yuhao Chen and I'm trying to use guild to predict disease-associated genes. I download GUILD using SBI mirror and compile the file with your instruction. But error was found during compiling:
make: *** [makefile: 100: graph/Graph.o] Error 1

I am not familiar with c++, so I hope you can provide me with valuable suggestions for repairing this error.

And my operating system is Windows10 with gcc version 11.3.0, GNU Make 4.3.

Thanks for your help!

Yuhao Chen