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Emre Guney's Projects

biana icon biana

BIANA - A python framework for Biological Integration And Network Analysis

dream_azs icon dream_azs

Code for AstraZeneca-Sanger Drug Combination Prediction Challenge

drugbox icon drugbox

DrugBox: Parsers for various drug info databases

guild icon guild

GUILD - Genes Underlying Inheritance Linked Disorders - Network-based disease-gene prioritization algorithms

guildify icon guildify

GUILDify: a Python Pyramid-based web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms

guildifyr icon guildifyr

guildifyR: An R package for interacting with GUILDify (v2.0) web server for network-based prioritization of disease genes and drug targets

hotsprint icon hotsprint

Hot Spots of Protein Interfaces (HotSprint) database web interface

netzcore icon netzcore

Analysis for Guney & Oliva, 2012 & 2014 articles

pepper icon pepper

PePPer - Personalized Perturbation Profiler

proxide icon proxide

ProXide: Proximity based drug side effect detection

proximity icon proximity

Drug-disease proximity based therapeutic effect screening and analysis

pxea icon pxea

ProXimal pathway Enrichment Analysis

repurpose icon repurpose

Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers

telecomit icon telecomit

Methods implemented in the context of TelecomIT big data challenge 2014.

toolbox icon toolbox

Toolbox - generic utilities for data processing (e.g., parsing, proximity, guild scoring, etc...)

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