Git Product home page Git Product logo

arcadia-docker-builds's Introduction

Arcadia Science Docker Builds ๐Ÿณ

This repository is the central hub for Docker builds implemented by Arcadia Science. This includes the Dockerfiles and other files necessary for building Docker images for various toolkits at Arcadia Science. The purpose of this repository is to provide a centralized location of all Docker images used across Arcadia Science with clear documentation.

Docker User Guide and Contributing

For a quick intro to using Docker you can get started with the Docker Docs. The State Public Health Bioinformatics Consortium (STaPH-B) has also put together a nice user guide on Docker. We encourage users to implement our Docker images outside of Arcadia Toolkits and also contribute new Dockerfiles for software that is not already provided. If you have an issue with an existing software Docker image, please open an issue. If you would like to contribute a Dockerfile for software that is not already provided follow these steps:

  1. Fork the repository to your github account
  2. Clone the repository to your local machine
  3. Build and make modifications to the Dockerfile for the given software
  4. Add and commit the changes, and push the updates to your repository
  5. Create a pull request and an Arcadia Scientist will review the updates to ensure there are no conflicts
  6. We will then push the image to our hosting site

Glossary of Docker Images

Software Usage Version Link
fastp Preprocessing & QC of fastQ files 0.23.2 https://github.com/OpenGene/fastp

arcadia-docker-builds's People

Contributors

elizabethmcd avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.