Comments (3)
hoytpr
commented on June 5, 2024
Hi @henrykironde and thanks for the suggestion! Which lesson in organization genomics do you feel like would be using SSH? Are you thinking about using the SRA Toolkit or using SSH to access NCBI or ENA?
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henrykironde
commented on June 5, 2024
Hi @hoytpr, I think the scientists was missing the setup of putty. https://datacarpentry.org/cloud-genomics/02-logging-onto-cloud/index.html.
It worked well after and I think we can close this.
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hoytpr
commented on June 5, 2024
I see, well thanks anyway and have a great week! Really trying to put this lesson in good shape.
from organization-genomics.
Related Issues (20)
- Typo in the common problems section HOT 4
- Combine Data Tidiness and Planning for NGS HOT 1
- Combine (and reduce) the SRA Lesson HOT 3
- clarification HOT 1
- Lesson 3 REL4541B instructions no longer work as-written HOT 1
- topic for the repository HOT 1
- Ep1 Data Tidyness Metadata Example HOT 1
- Locate the Run Selector Table for the Lenski Dataset on the SRA does not work with IE HOT 2
- _episodes/03-ncbi-sra.md NCBI SRA dowload workflow error HOT 4
- SraRunTable.txt downloads as CSV, not TSV HOT 2
- Ask about learners' science in data tidiness first discussion? HOT 3
- Some issues https://datacarpentry.org/organization-genomics/02-project-planning/index.html HOT 1
- Need jump lists (anchors) for headings HOT 1
- Standardise heading levels
- Data tidiness file download issue HOT 3
- Updates required in ‘Examining Data on the NCBI SRA Database’ HOT 2
- Suggestion for page: Project Organization and Management for Genomics: Data HOT 2
- Scheduling early transition to Workbench HOT 2
- Transition To Workbench in May HOT 25
- Links need to be fixed in CONTRIBUTING.md HOT 6
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