cmap Goto Github PK
Name: Connectivity Map at the Broad Institute
Type: Organization
Bio: Helping drug discovery, one signature at a time
Location: Cambridge, MA 02142
Blog: https://clue.io
Connectivity Map at the Broad Institute's Projects
adc-white-paper
cmap-sig-tools
Reference documentation and usage notes for core CMap tools.
cmap_notebooks
CMAP public jupyter notebooks
cmapbq
cmapj
Connectivity Map software for Java
cmapm
Connectivity Map analysis in MATLAB
cmappy
Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools
cmapr
Tools for manipulating annotated data matrices
cte
What the Package Does (One Line, Title Case)
ctg
Sync and sort data for use with the CTG app
ctg_pipeline
cup
QC module for Luminex based PRISM data
cup_streamsync
Streamsync version of cup app
deconv
Repo for paper: "Improving Deconvolution Methods in Biology"
demo-portal-logn
dockerized_mts
dockers
gct2bq
gene_deconvolution_challenge
Source code for the top finishers from the CMap Gene Deconvolution challenge
gsea_wrapper
jupyter-docker
jupyterhub
lincs-cell-painting
Processed Cell Painting Data for the LINCS Drug Repurposing Project
lincs-workshop-2020
CMap Notebooks for LINCS 2020 Workshop
merino
Pre-publication data flow for PRISM multiplex cell viability assay
morpheus-export
export static heat maps using Morpheus.js
morpheus.js
JavaScript matrix visualization and analysis
morpheus.r
R interface to morpheus.js heatmap widget
mts_biomarker
panel
QC app implemented in panel
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