Comments (1)
That's a good observation and should be supported! It may be a backwards incompatible feature request but I think an important one to better honor the specification:
Additional user-defined sections may be added to the Sample Sheet, as long as they adhere to the Sample Sheet formatting rules described above. They also cannot be named the same as sections defined by Illumina, and must be placed between the Header section and the Data section. These sections will be ignored by Illumina software, but can be used to store additional information for record keeping purposes or for processing in third-party software. Illumina may add to the standard Sample Sheet sections in the future without regard for naming conflicts with sections used by third-party software.
I'm a little slow in its release but have been developing a better API for this library and am taking all of these requests into consideration. Thank you!
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Related Issues (20)
- Support Python2 HOT 1
- Support comments HOT 2
- Feature Request: SampleSheet v2 support HOT 9
- validator HOT 7
- How to update the sample sheet object? HOT 1
- index validation HOT 2
- Intended behavior of empty samplesheet with missing sections HOT 1
- Index validation on indexes with spaces at the end
- relationship with PEP HOT 1
- Issue1: special character
- Confusing error on file with no sections
- test_to_picard_basecalling_params_output_files fails on MacOS
- Appetite for looking up samples by Sample_ID HOT 1
- Feature request: support read structures like `+T` HOT 1
- PE + Multi index HOT 2
- Add option do deactivate sanity check for reading sample sheets and adding samples
- Sample_ID validation
- Do you support custom application settings and data sections? does Illumina? HOT 1
- Error parsing samplesheet HOT 1
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