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evowikipedia's Issues

add- Phylogenetics category to more pages

A lot of pages are not labeled with the Category "Phylogenetics". We need to ad more to relevant pages. You can only do this in the Edit Source mode, scroll to bottom and copy/paste one of the Category lines, change it to "Phylogenetics"

Long branch attraction

There is room for clarification and additional references in this entry. For example, several places refer to methods that are susceptible:

  1. "LBA can result from a variety of scenarios and be inferred under multiple analysis paradigms"
  2. "LBA was first recognized as problematic when analyzing discrete morpological character sets under parsimony criteria, however Maximum Likelihood analyses of DNA or protein sequences are also susceptible"
  3. "When this happens, parsimony may erroneously interpret this homoplasy as a synapomorphy (i.e., evolving once in the common ancestor of the two lineages)."

The first seems reasonable. The second seems too specific pointing out ML applied to DNA and protein, which makes it seem like Parsimony and ML applied to DNA/prot matrices are the only susceptible scenarios. The last makes it seem like parsimony is the only method susceptible.

edit - Phylogenetic comparative methods

This needs to be significantly overhauled. The field has shifted to referring to pcms in a way that is much broader than "correcting for phylogeny" using PICs and PGLS.

I think I will take a crack at this one.

Edit: Living fossil

https://en.wikipedia.org/wiki/Living_fossil
The page is already calling for additional citations and verification. It conditions the term as an "informal non-scientific term, mostly used in the lay media." then treats the rest of the page as if the concept is widely accepted in the scientific community and includes case studies. Overall, it leads to confusion at best and non-tree (ladder) thinking at worst

SOWH Test

There is no wikipedia entry for the SOWH Test

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