mwpennell Goto Github PK
Name: Matt Pennell
Type: User
Company: University of Southern California
Bio: Associate Professor of Quantitative and Computational Biology at USC
Twitter: mwpen
Location: Los Angeles, USA
Blog: mwpennell.ca
Matt Pennell's Projects
acid
A-Ci Database
arbutus
Assessing the adequacy of phylogenetic models of quantitative trait evolution
biol-548o
Materials for Dealing with Data Course
capwire
capwire r pacakge
chromrevolver
Generate input files for ChromEvol using the Chromosome Counts Database and the chromer package
dissertation
Contents of my PhD dissertation
dwd
Materials for dealing with data graduate moduel
extinction-timetree
Testing whether model non-identifiability can explain low extinction rate estimates
fuse
Analysis of sex chromosome fusions
geiger-v2
A suite of methods and models for studying evolutionary radiations
handson-ml2
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
henaodiaz_2019_trees
repo of phylogenies
macro_sadler
Apparent time-dependency of macroevolutionary diversification rates
maker
Make-like declarative workflows in R
mwpennell.github.io
Website of Matt Pennell
phylopca
code and manuscript for phylo pca paper
poole
The Jekyll Butler. A no frills responsive Jekyll blog theme.
publications
PDFs of Pennell Lab Research Papers
r-phylo
phylogenetic comparative methods in R
thesis-style
Thesis style for the University of Idaho
traitmodels-wme
Tutorials for working with trees in R
tsr
R code for examining effects of temperature size rule on consumer resource dynamics
ubc-biol548o-w2020
course materials for BIOL 548O Dealing with Data
vert_trans
Analysis of sex chromosome evolution across the phylogeny of vertebrates
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