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This repository contains the code to reproduce our exploratory analysis of a pan-cancer plasma proteomics dataset, including differential expression analysis and disease classification (https://doi.org/10.1038/s41467-023-39765-y). The data can be explored in the Human Protein Atlas: www.proteinatlas.org/humanproteome/disease.

License: Apache License 2.0

R 100.00%
disease-classification pan-cancer-analysis proteomics-data-analysis

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birajaghoshal samanashtiani

pan-cancer-profiling's Issues

Missing metadata

Hi,

Great study and thank you for providing the data and code to replicate the results in your study. Unfortunately, I seem to be unable to find the meta-data for the data file on BioStudies (S-BSST935). The data file contains unique IDs for each patient, but there is no clear way of associating these with the metadata in the Source data / supplementary excel sheet (tab 1a).

It would be great if you could provide a table linking the metadata unambiguously to the entries in S-BSST935.

Thanks, T

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