Comments (1)
Is this really fixed? I can confirm that no channel sum is added to the file. However, the omefolder_2_analysisfolder
function still requires entries of length 3 rather than of length 2. Please also remove this from the docs and the ImcSegmentationPipeline.
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Related Issues (20)
- extract panorama HOT 4
- Make exceptions discoverable in API HOT 3
- Extra 161 bytes extracted on all image buffers HOT 1
- TxtParser and McdParser should share a common base class
- Wrong ROI coordinates for new Fluidigm software versions HOT 4
- Create imctools.data.Acquisition object without loading image data when using TxtParser
- Feature request: option to export additional columns in omefile_2_analysisfolder HOT 4
- KeyError: 'Name' HOT 11
- ValueError: invalid literal for int() with base 10: HOT 1
- Broken assertion HOT 3
- ome2histocat stripps .tiff file ending from masks HOT 2
- Value Error: No session JSON files available HOT 3
- Error while running IMCtools HOT 4
- Generated OME-XML in OME-TIFF files is not schema compliant due to out-of-order AcquisitionDate element HOT 3
- broken link to xml namespace HOT 1
- imctools.scripts HOT 2
- Typo in method omexml.py HOT 2
- Inquiry about omexml.py related to schema location HOT 2
- NotADirectoryError: [Errno 20] Not a directory: '../../data/ometiff/.DS_Store/.DS_Store_Acquisition_meta.csv' HOT 4
- Adding clear specification of the 'ome' folder HOT 1
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