bioinfomaticscsu / multiguidescan Goto Github PK

I have installed MultiGuideScan in a conda environment with the following dependencies installed: python==2.7.16, scikit-learn==0.16.1, coreutils, rename, biopython==1.66, pysam==0.8.3, pyfaidx==0.4.7.1, bx-python==0.7.3

However upon checking the guidescan commands can run with --help it seems that some additional dependencies (that may already be on most systems) are required:
guidescan_cutting_efficiency_processer requires pandas
guidescan_guidequery requires xlwt

After installing these additional dependencies, I am getting the following error for guidescan_processer --help and guidescan_bamdata --help

This seems to be related to the commented section at lines 306-331 of ..../lib/python2.7/site-packages/guidescan/guides.py