bglarkin / tallgrass_restoration_legacies Goto Github PK

Remember to do the final diagnostics (which you should have done to start with!)

• Plot sequence abundance vs richness. Whatever the outcome, you may have to explain it if there is a relationship. The lines may look different among field types
• Produce rarefaction curves for each site. Look for outliers or obvious evidence that we have significantly undersampled. Do this with the set of 6 samples per field, and/or with all the samples we have.

Remember to produce this plot and test in the microbial communities script. It isn't a constrained anaylsis; those will be done later with environmental variables. But this is a quick way to get a naive test on years since restoration, and it's likely to be significant with all microbial datasets.

Now for some reason one of the remnants is NA. I need to re-run all the code and troubleshoot. This is endless.

"Blob is taking too long to generate." This might be because I've added too much inline code?

It's a poor name. How about ETL?