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CP2K_OPT_GEO.xyz is the optimized coordinates from CP2K in XYZ format
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DDEC6_even_tempered_net_atomic_charges.xyz and DDEC_atomic_Rcubed_moments.xyz are the Chargemol output files with atomic charges and volumes
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GO_sheet_#_#.gro is the initial coordinates (produced with the MakeGraphitics library) in GROMACS format
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GO_sheet_#_#.top is the GAFF2-AIM topology in GROMACS format
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amber99sb-ildn.ff-modified/ is the amber99sb-ildn force field in GROMACS format, modified with GO sheet parameters (taken from https://www.bio2byte.be/acpype/)
Note: Since these structures are periodic in the XY plane, they are meant to be used with the "periodic-molecules = yes" option in the *.mdp file of GROMACS.
Pinto, A.V. et al. (2022) “Development of Nanoscale Graphene Oxide Models for the Adsorption of Biological Molecules” The Journal of Physical Chemistry B. Available at: https://doi.org/10.1021/acs.jpcb.2c06037.
GO_18, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323314#.Y7w_Q9LP1AM
GO_20, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323388#.Y7w_sdLP1AM
GO_22, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323436#.Y7w_zdLP1AM
GO_24, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323444#.Y7w_5tLP1AM
GO_26, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323454#.Y7w__dLP1AM
GO_28, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323465#.Y7xAJNLP1AM
GO_30, files from linear-scaling DFT and non-bonded parameters calculations https://zenodo.org/record/7323484#.Y7xAOtLP1AM