zwdiscover Goto Github PK
Name: rainbowdx
Type: User
Location: CA, USA
rainbowdx's Projects
python-cheatsheet
Comprehensive Python Cheatsheet
python_for_image_processing_apeer
https://www.youtube.com/playlist?list=PLHae9ggVvqPgyRQQOtENr6hK0m1UquGaG
python_for_microscopists
https://www.youtube.com/channel/UC34rW-HtPJulxr5wp2Xa04w?sub_confirmation=1
rnabio.org
website for the rnaseq course
scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
scientific_python_cheat_sheet
simple overview of python, numpy, scipy, matplotlib functions that are useful for scientific work
seq
A high-performance, Pythonic language for bioinformatics
seurat
R toolkit for single cell genomics
single-cell-best-practices
https://www.sc-best-practices.org
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
singlecellworkshop
smap
spatial-omics-dataset
split-fish
A multiplexed FISH image analysis pipeline used to analyze split-FISH data. Publication available here:https://www.nature.com/articles/s41592-020-0858-0
starfish
starfish: unified pipelines for image-based transcriptomics
ten_great_papers
Ten great papers for wet lab biologists starting out in computational biology
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