undefined reference to `gzopen' about 2brad_denovo HOT 3 OPEN

On Tue, Mar 5, 2024 at 1:22 AM 01Andrea01 ***@***.***> wrote: Hello, I'm trying to install the required packages and I have an issue, most likely because I'm a noob. I'm installing ngsF but I receive the following error message: ***@***.***:~/ngsF$ make HTSSRC=../htslib g++ -O3 -Wall -I -I/home/andrea/htslib -I -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_USE_KNETFILE ngsF.cpp parse_args.o read_data.o EM.o shared.o -lgsl -lgslcblas -lm -L -lz -lpthread /home/andrea/htslib/libhts.a -o ngsF /usr/bin/ld: read_data.o: in function init_output(params*, out_data*)': read_data.cpp:(.text+0x253): undefined reference to gzopen' /usr/bin/ld: read_data.cpp:(.text+0x271): undefined reference to gzread' /usr/bin/ld: read_data.cpp:(.text+0x28f): undefined reference to gzread' /usr/bin/ld: read_data.cpp:(.text+0x2ac): undefined reference to gzread' /usr/bin/ld: read_data.cpp:(.text+0x32f): undefined reference to gzread' /usr/bin/ld: read_data.cpp:(.text+0x38e): undefined reference to `gzclose' collect2: error: ld returned 1 exit status make: *** [Makefile:40: ngsF] Error 1 I checked for zlib and it's installed on my system. Any idea how to unstuck this? Thanks! — Reply to this email directly, view it on GitHub <#7>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABZUHGBNYSEQATBYTBGVG3LYWVXC7AVCNFSM6AAAAABEGSQPVSVHI2DSMVQWIX3LMV43ASLTON2WKOZSGE3DQNBYGAZDSNA> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>