Comments (2)
Hi,
You including the path to gsl header files seems to work with a warning. Is the run_rms_tests.out file generated? If you run ./run_rms_tests.out
, can you see the help information?
Yupeng
from methylpy.
Hi Yupeng, yes I can see the help information now, and I ran DMRfind without any issues. Thanks!
from methylpy.
Related Issues (20)
- DMRfind use two samples is ok but a lot of samples is wrong HOT 24
- Methylpy and Bismark for alignment
- Where is the methylation difference reflected in the DMRfind code HOT 11
- Average methylation level of a sample HOT 1
- DMRfind fails with key error 179 HOT 2
- run_test.py fails HOT 21
- cutadapt error for methylpy v 1.4.6 HOT 3
- Running RMS tests failed. HOT 18
- Ubuntu Optional step to Compile rms.cpp is formatted wrong HOT 1
- bam-quality-filter NOMe-seq HOT 2
- Methylation calling in non-directional libraries HOT 1
- Help for parameters tuning.
- mapping to a large genome HOT 1
- Methylpy in plant HOT 7
- DMR HOT 4
- binom-test failed HOT 15
- DMRfind-Histogram FDR correction did not converge. HOT 1
- NAs of methylpy add-methylation-level result HOT 5
- low align rate conflicting with bismark align rate HOT 4
- how to acquire or calculate the mapping efficiency using methylpy? HOT 3
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