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demodocs

Where to put demos of documents

djekyll

dna_melting_bubbles_tidd

docker-dash

Dash app docker image running on AWS ECS

dream_promoter

easy_prime

prime editor gRNA design tool based on ensemble learning

easy_prime_docker

docker build for easy prime

eg-react

WashU Epigenome Browser

emotif_alpha

encode-dream

ethnicolr

Predict Race and Ethnicity Based on the Sequence of Characters in a Name

first_blog

gata1_peak_analysis

GATA1 peaks in different cell types, a cell type classification based on DNA motifs

genome_partition

partition genome into blocks according to Four Gamete Test

gimmemotifs

Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.

git-katas

A set of exercises for deliberate Git Practice

give_me_all_grnas

Output a list of all gRNAs in user-given regions, also provide GC content and Off Targets

guidednmf

[Paper] Repository for the paper "On a Guided Nonnegative matrix factorization," published in IEEE ICASSP 2021.

hemtools

HemTools: a collection of NGS pipelines and bioinformatic analyses

hic_matrix_oe_plot

HIC plot

hichip

HiChiP QC and data analysis

hpfh_code

hpfh_mutation

UCSC track hub

human_mouse_rbp

igvnav

in_silico_pcr

Perl script for simulating PCR reactions. Extract sequences from a query based on primer sequences.

jekyll_theme_liyc

keras_dna

languages

leetcode-1

LeetCode Solutions: A Record of My Problem Solving Journey.( leetcode题解，记录自己的leetcode解题之路。)