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varna's Introduction

VARNA

Compilation

ant compile
ant jar
ant run

Usage

For use with command line arguments :

java -jar build/jar/VARNAcmd.jar -i [INPUT] -o [OUTPUT]

varna's People

Contributors

ixeft avatar yannponty avatar eliottl avatar

Stargazers

avatar Benoit Baudry avatar Deepika Tiwari avatar Marco Matthies avatar Atsushi Yamaguchi avatar avatar

Watchers

Daniel Wiegreffe avatar avatar

Forkers

bobhanson tzok jnnstchr sargueil-citcom anthonyhtyao s-will naaaaaaaan

varna's Issues

Unmappable Characters for ant compile

Hi, please change or remove some characters from a few files. ant compile fails when encountering these characters:
® in :
VARNA/src/fr/orsay/lri/varna/models/export/BackboneEndCommand.java

é from Université in :
VARNA/src/fr/orsay/lri/varna/models/export/BackboneEndCommand.java
VARNA/src/fr/orsay/lri/varna/models/export/BackboneStartCommand.java
VARNA/src/fr/orsay/lri/varna/models/export/BaseEndCommand.java
VARNA/src/fr/orsay/lri/varna/models/export/BasePairEndCommand.java
VARNA/src/fr/orsay/lri/varna/models/export/BasePairStartCommand.java
VARNA/src/fr/orsay/lri/varna/models/export/BaseStartCommand.java

Thank you.

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