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Xin Yin's Projects

akka icon akka

Build highly concurrent, distributed, and resilient message-driven applications on the JVM

avro4s icon avro4s

Avro schema generation and serialization / deserialization for Scala

bam_subsample icon bam_subsample

A tool to generate FASTQ reads and "ground truth" sequencing errors from Illumina datasets based on alignment results.

bcf_snp_patch icon bcf_snp_patch

Generate ground truth errors from SAM/BAM file, after adjusting for SNPs reported in VCF/BCF file

bus-notify icon bus-notify

A python script that watches nearby bus schedules

cli-grader icon cli-grader

Utilities for entering and submitting grades to Blackboard Learn system in ncurses-supported terminals.

cloud icon cloud

Materials for the cloud computing group in the Iowa State University Department of Statistics

duolingo-minidict icon duolingo-minidict

A Greasemonkey/Tampermonkey user script that provides dictionary lookup functionality

duplextag-seq icon duplextag-seq

Collection of tools to process the reads generated by Duplex Tag Sequencing technique developed by Schmitt et al. (2013)

ggvis icon ggvis

Interactive grammar of graphics for R

gptq icon gptq

Code for the paper "GPTQ: Accurate Post-training Quantization of Generative Pretrained Transformers"

kmc icon kmc

Fast and frugal disk based k-mer counter

metals icon metals

Scala language server with rich IDE features 🚀

nodebox-opengl icon nodebox-opengl

Free, cross-platform library for generating 2D animations with Python programming code.

selectize.js icon selectize.js

Selectize is the hybrid of a textbox and <select> box. It's jQuery based and it has autocomplete and native-feeling keyboard navigation; useful for tagging, contact lists, etc.

shap icon shap

A game theoretic approach to explain the output of any machine learning model.

shap4j icon shap4j

JVM bindings for the SHAP library

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