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coral_genome_catalaphyllia_jardinei's Introduction

Catalaphyllia jardinei genome analysis

Data analysis and supplementary materials of genome comparisons on Catalaphyllia jardinei and 33 other cnidarians.

Citation of scripts:

Yichun. (2022). xieyichun50/Genome-macrosynteny-gene-family-evolution: Genome-macrosynteny-gene-family-evolution-v1.0. Zenodo. DOI: 10.5281/zenodo.6810089

Publication

Yu, Y., Nong, W., So, W.L., Xie, Y., Yip, H.Y., Haimovitz, J., Swale, T., Baker, D.M., Bendena, W.G., Chan, T.F., Chui, A.P.Y., Lau, K.F., Qian, P.-Y., Qiu, J.-W., Thibodeau, B., Xu, F., & Hui, J.H.L. (2022). Genome of elegance coral Catalaphyllia jardinei (Euphylliidae). Frontiers in Marine Science, 9, 1–12. https://doi.org/10.3389/fmars.2022.991391

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coral_genome_catalaphyllia_jardinei's Issues

How to generate Orthogroup.stat.txt

老师好,感谢您分享的脚本,我很幸运在做比较基因组时遇见了您的教程,这给我了很大的帮助。

我在运行[gene_family_summary.R]https://github.com/xieyichun50/coral_genome_Catalaphyllia_jardinei/blob/main/scripts/gene_family_summary.R
我没找到Orthogroup.stat.txt这个文件。

我已严格按照您示例的步骤运行在我的数据上,您能告诉我Orthogroup.stat.txt这个文件是怎么生成的吗?

感谢您的帮助,祝老师一切都好!

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