wormbase Goto Github PK
Name: WormBase
Type: Organization
Bio: The central repository for information on the experimental system C. elegans
Location: Your lab bench
Blog: https://wormbase.org/
WormBase's Projects
website-classic
The original version of the WormBase website.
website-datomic
website-gbrowse2-support
Configuration and miscellaneous support files for our GBrowse2 installation
website-genome-browsers
website-intermine
website-intermine-master-deprecated
Master configuration and model files for Intermine at WormBase
website-intermine-sources-deprecated
The Intermine instance at WormBase
website-jbrowse-gff
Dockerfile for processing GFF data for JBrowse
website-jbrowse-protein
Dockerfile for building protein schematic
website-mobile
Mobile version of the WormBase website
website-public
WormBase webiste source code public mirror
wormbase-architecture
wormbase-curation
Scripts and documentation related to WormBase curation efforts
wormbase-pipeline
Wormbase Build Pipeline
wormbase_rest
This is an API to the datomic database and provides data to catalyst on a per widget basis as well as information for tools like blast.
wormcells-notebooks
This repository collects all the notebooks and scripts used to wrangling C. elegans scRNAseq data and processing it with scvi-tools for the wormcells-viz and scdefg app
wormcells-viz
Visualization tools for C. elegans single cell RNA sequencing data
wormicloud
Interaction data analysis with word clouds
wormmine-bio-sources
wormmine_help
wormmine_testing
Small web app that automatically tests releases
xvi_iss_2022
Course material for WormBase ParaSite's course at the XVI International Symposium on Schistosomiasis that took place in Ouro Preto, Brazil (November 2022).
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