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Related Issues (20)
- SAIGE-GENE+ install HOT 3
- Error in getopt(spec = spec, opt = args) : long flag "bedFile" is invalid HOT 4
- Error at step2 on chrX
- Can't install
- Can dominant model be used in single variant test?
- samples in geno file do not have phenotypes
- createSparseGRM error
- possible issue with categorical variables used as covariates?
- Should this SAIGE be closed since you have a new SAIGE page?
- How do you create the SparseSigmafile?
- createSparseGRM script (step0) doesnβt work
- Step1, sorting of sample ids
- Trying to get LOCO=True to work
- Error in mainRegionInCPP
- R CMD INSTALL SAIGE
- Chromosome coding UKBB
- Error running Step 1 on UKBB dataset.
- The appropriate sample size for continuous and binary traits analysis in SAIGE-GENE+
- Pre-computed group files for UKB WES
- Step 1 with sparse GRM gets stuck on "use sparse kinship to fit the model" HOT 1
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