wangjie07070910 Goto Github PK
Name: Jie Wang
Type: User
Company: MPI
Location: Germany
Name: Jie Wang
Type: User
Company: MPI
Location: Germany
Systematic Analysis for Quantification of Expression
scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder
SCODE : an efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation
Check sex of samples
Tools which deal with multiple single cell measurements
sitecopy is a tool that facilitates personal website backup and network data collection
Biodiversity Genomics Academy 2023: Understanding k-mers and ploidy using Smudgeplot
Customizable workflows based on snakemake and python for the analysis of NGS data
Next generation sequencing reads de novo assembler.
A flexible framework for rapid genome analysis and interpretation
Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference
A tool written for phasing variants called from stLFR data.
This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What you should prepare is the phased vcf file containg the data of populations you interested and the outgroup, the outgroup name file, and the annotation file. Enjoy it!!!
calculate genetic diversity within multiple species using both k-mer based and snp-based approaches
Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4
A bioinformatics tool for detecting novel transposable element insertions
TELR is a fast non-reference transposable element detector from long read sequencing data.
TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing data
Algorithm to detect germline and de novo transposon insertions
Tutorials on evolutionary genomics
I have used Multinomial Naive Bayes, Random Trees Embedding, Random Forest Regressor, Random Forest Classifier, Multinomial Logistic Regression, Linear Support Vector Classifier, Linear Regression, Extra Tree Regressor, Extra Tree Classifier, Decision Tree Classifier, Binary Logistic Regression and calculated accuracy score, confusion matrix and ROC(Receiver Operating Characteristic) and AUC(Area Under Curve) and finally shown how they are classifying the tweet in positive and negative.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.