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roduct名称|问题|解决方案|优先级|负责人
6个工作流|运行时间过长|新版计算系统下午重新测试|P0|王焕威、王玉梅|
5个工作流|名称中含有中文|新版计算系统下午重新测试|P0|王焕威、王玉梅|
HISAT+StringTie RNA-Seq差异表达分析流程|未绑定默认输入文件 重新绑定|P0|王焕威、王玉梅|
BWA-mem|显示编译失败;
查splunk发现默认绑定数据获取失败;File or directory /zjuwhw/SharedWithMe/public/ucsc_hg19_bwa_index.tgz does not exists;
不用这个文件后,可以成功运行|重新加入默认输入|P0|李明、王焕威|
BWA-index|日志报错:tar: std.out: file changed as we read it
代码是:tar czvf {% for index in outputs.index %}{{ index.path }}{% endfor %} * |新版计算系统下午重新测试|P0|王焕威、王玉梅|
GATK人类全外显子组变异分析(Lite版 2.3.9 分染色体)及测试数据|但是里边的工具“ index_dict_reference”的日志显示错误,无法生成dict文件,但后边gatk 2.3.9会自动检测和生成
日志报错:Unable to access jarfile /bioapp/picard/CreateSequenceDictionary.jar
代码是:java -Xmx16g -jar /bioapp/picard/CreateSequenceDictionary.jar|找镜像|P0|王玉梅、王焕威|
RNA-Seq差异表达工作流及测试数据|工具“ RSeQC-RPKM_count”日志显示错误:
日志报错:/var/data/run.sh: line 5: syntax error near unexpected token ;' /var/data/run.sh: line 5:
python /bioapp/RSeQC-2.6.2/scripts/RPKM_count.py -i case.bam -r /var/data/57a41ed95346800016f94271.bed -o accepted_hits -q 30 & ;'|修改多“;”|P0|王玉梅|
||gdtools pull yml文件格式不对,mapping values are not allowed here
in "5618da9d534680001881f44d/APP/5618b31d534680001581f3f9_app.yml", line 82, column 11 修改gdtools|P2|陆晞彤、王玉梅|
GATK人类全外显子组变异分析(Lite版 2.3.9 分染色体)及测试数据|报告中的表格显示有问题|找issue|P0|李明|
FastQC和测试数据|允许多个fastq文件输入,把输出tgz打包,但是报告只能给一个fastq的报告| P3||
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