This is code for the final project for BINFG4003.
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mimicR: R and rust code used for parsing mimic noteevents file. requries rust toolchain to install
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ICD_and_DRG_exploration.Rmd : mapping between ICD and DRG codes, and mapping between DRG code and medicare costs
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depth_data_analysis.Rmd : comparison of depth with term counts
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freetext_mapping_exploration.Rmd : Parse results of MetaMap and convert to ICD9 via UMLS
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initial_count_data_exploration : initial exploration of ICD9 counts and calculation of term depth
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networkx_SNOMED_depth.py : depth calculation of SNOMED terms