veupathdb Goto Github PK

dataset-installer-isasimple

GUS env for running EDA Plugins

diagrams

Source code for diagrams made with tools such as diagrams.net (formerly draw.io)

diamond-similarity-nextflow

Nextflow workflow substituting diamond for blast

djob

dnaseq-nextflow

DNASeq Alignments with SNP and CNV nextflow workflow

docker-alpine-dev-base

Alpine Linux image with Oracle Instant Client and OpenJDK

docker-apache-kafka

Dockerized Apache Kafka with KRaft

docker-dev-minio

Moddable, Alpine-based MinIO docker image.

docker-edirect

docker-edirect container repository

docker-galaxy-python-tools

Docker image containing the necessary Python2 and C Lib prerequisites to run the EuPathGalaxy python tools.

docker-gus-apidb-base

Docker image definition for an image that contains the GUS model objects and the ApiDB schema loaded in postgres.

docker-hq

django app for EuPathDB hq infrastructure reporting app

docker-minio

docker-minio-mc

Tiny container containing the MinIO MC script.

docker-rabbitmq

VEuPathDB RabbitMQ deployment configuration.

docker-short-read-aligner

docker-short-read-aligner container repository

docker-tools

docker-traefik

Traefik development environment for VEuPathDB BRC

docker-vcf-parser-cnv

vcf_parser_cnv container repostitory

docs-api-schema

Common/Generic RAML type definitions.

dots

ebi2gus

Code related to representing data from E! Core workflow in GUS schema

ebrcmodelcommon

ebrcwebsitecommon

ebrcwebsvccommon

eda-nextflow

eda-workspace-client-core

edacommon

Contains code, API and schema documents, and any other data needed by multiple EDA web services

edadataservice

edadatasets