Git Product home page Git Product logo

medsam-for-bleeding-area's Introduction

MedSAM for bleeding area

Introduce

Environment

Run the prepare.sh to auto-create the virtual environment for classification and instance segmentation:

bash -i prepare_env.sh

⚠️ Since the environment of classification and instance segmentation will be installed separate, the i in bash -i prepare_env.sh is necessary.

1.1 Classification

Download the testing classification data from here. Unzip the classification_data.zip and classification_weight.zip, moving them into classification folder.

YOUR_PATH\AUTO-WCEBLEEDGEN-CHALLENGE-VERSION-V2\CLASSIFICATION
├───config
│   ├───efficientnet
│   └───_base_
│       ├───datasets
│       │   └───pipelines
│       ├───models
│       └───schedules
├───data <- *From classificaiton_data.zip*
│   └───WCEBleedGen_v2
│       ├───test1
│       │   ├───bleeding
│       │   └───non-bleeding
│       ├───test2
│       │   ├───bleeding
│       │   └───non-bleeding
│       ├───train
│       │   ├───bleeding
│       │   └───non-bleeding
│       └───val
│           ├───bleeding
│           └───non-bleeding
├───datasets
│   └───pipelines
├───tools
└───weight <- *From classificaiton_weight.zip*

medsam-for-bleeding-area's People

Contributors

vanlinlin avatar

Watchers

Kostas Georgiou avatar  avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.