Comments (5)
@aljevandam, are these coordinates important?
from scca.
I think coordinates are important for plotting of the results
from scca.
Oke, clear. What do you think about the first item of the proposal?
from scca.
The coordinates are indeed used for plotting. In general, the package need not deal with the cooridnates, other than perhaps merging them with the results in the end. In this sense, the coordinates may be treated as 'labels' (e.g. in other datasets the coordinates may be city names, sample id's etc..)
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Sounds like this is something outside the scope of the package, isn't it? It seems to be something specific for this dataset and not something general. Nevertheless, I do not have strong opinions on this. My only remark is on the API. For a clear and consistent API, I think carnivores
should return the matrix. Other datasets to add can also return this matrix. If we want the coordinates, we can add carnivores_coord
.
from scca.
Related Issues (20)
- Accept matrices without colnames and rownames in the function scca HOT 1
- Trade flow dataset name HOT 2
- Raw datasets not available HOT 2
- Flat file export of tree HOT 1
- Problems with exports dataset because there are no rownames HOT 4
- Technicalities to be dealt with considering eigenvalue computation and normalization (mostly for own reference, to be discussed)
- k-means nstart parameter HOT 1
- Disconnected columns and rows HOT 1
- stability measures
- iterations
- normalization eigenvectors when computed using 'trick' HOT 1
- Error when plotting overlap
- Error decomp = svds
- stability
- Validity
- Typo in vignette
- List of required narrative HOT 3
- License HOT 5
- Publish vignettes on gh-pages
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