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data cleaning and curation for forest tree, woody debris, and soil inventory data from long-term research plots for LTREB at the University of Michigan Biological Station

Home Page: https://portal.edirepository.org/nis/mapbrowse?scope=edi&identifier=243

License: Creative Commons Attribution 4.0 International

R 100.00%
woody-debris data dataset environmental-data-science r biomass soil-data data-cleaning umbs

umbs-ltreb's Introduction

View the most recent version of the data repository at https://portal.edirepository.org/nis/mapbrowse?scope=edi&identifier=243

UMBS LTREB Data Tables

1. Above Ground Biomass Estimates

A. Methods: see methods metadata  
B. Temporal coverage: 1934 to 2019  
C. Raw data:   
	1. AGB_2014_clean.csv: cleaned by Alina Drebin in 2018 as part of package edi.243.2, however only incomplete data cleaning information was found as of 2020  
	2. AGB_2019_raw.csv: raw 2019 measurements and calculations from Luke Nave  
D. Data cleaning:   
	1. LTREB_AGB_2019_cleaning.Rmd: cleaned by Alexandria Pawlik  
E. Output: agb.csv  
F. Other related files:  
	1. UMBS_plots.csv: information about all observed UMBS plots  

2. Course Woody Debris Measurements

A. Methods: cwd_procedure.pdf  
B. Temporal coverage: 2014 to 2019  
C. Raw data:  
	1. CWD_2014_raw.csv: raw 2014 measurements and calculations from Luke Nave  
	2. CWD_2020_raw.csv: raw 2019 measurements and calculations from Luke Nave in 2020  
D. Data cleaning:  
	1. LTREB_CWD_cleaning.Rmd: 2014 data cleaning by Alina Drebin in 2018 as part of package edi.243.2, otherwise cleaned by Alexandria Pawlik
E. Output: cwd.csv
F. Other related files:
	1. UMBS_plots.csv: information about all observed UMBS plots

3. Sapling Counts

A. Methods: see methods metadata
B. Temporal coverage: 2014 to 2019
C. Raw data:
	1. saplings_2014_raw.csv: raw 2014 measurements and calculations from Luke Nave
	2. saplings_2019_raw.csv: raw 2019 measurements from Luke Nave
	3. saplings_biomass.csv: calculated values for 2019 data, from Luke Nave in 2020
D. Data cleaning:
	LTREB_saplings_cleaning.csv: 2014 data cleaning by Alina Drebin in 2018 as part of package edi.243.2, otherwise cleaned by Alexandria Pawlik
E. Output: saplings.csv
F. Other related files:
	1. UMBS_plots.csv: information about all observed UMBS plots

4. Soil Makeup

A. Methods: soils_procedure.pdf
B. Temporal coverage: 2014 (samples collected in 2014, measured over the following year)
C. Raw data:
	1. soils_2014_from_Mfield.csv: raw 2014 measurements from Mfield data upload
D. Data cleaning:
	1. LTREB_soils_cleaning.Rmd: 2014 data cleaning by Alina Drebin in 2018 as part of package edi.243.2, otherwise cleaned by Alexandria Pawlik
E. Output: soils.csv
F. Other related files:
	1. UMBS_plots.csv: information about all observed UMBS plots

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