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annealedis.jl's Introduction

AnnealedIS

This is a small package implementing Annealed Importance Sampling. Its key features include:

This implementation here should be seen as a proof of concept. It is not optimized for performance yet and the API design will likely change in the future.

Usage example

Integration with Turing:

using Turing
using AnnealedIS

@model function model(y)
    x ~ Normal(0, 1)
    y ~ Normal(x, 1)
end

y_obs = 2
chains = sample(model(y_obs), AnIS(20), 1000)

For more usage examples see the test/ folder.

References

Neal, R. M. (1998) "Annealed importance sampling", Technical Report No. 9805 (revised), Dept. of Statistics, University of Toronto, 25 pages

annealedis.jl's People

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annealedis.jl's Issues

AdvancedIS

Hi @treigerm, would you be interested in adding this to an AdvancedIS package in Turing?

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