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Comments (3)

lmulroney avatar lmulroney commented on August 28, 2024

Hi @Rohit-Satyam,

How did you install nanocompore?

Thanks,
Logan

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Rohit-Satyam avatar Rohit-Satyam commented on August 28, 2024

Hi

I used the following command to install nanocompore

mamba create -n nanocompore -c bioconda -c conda-forge bedparse nextflow nanopolish bedtools samtools minimap2 f5c nanocompore

The error was resolved by downgrading numpy

mamba install -c conda-forge -c bioconda numpy==1.20

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Rohit-Satyam avatar Rohit-Satyam commented on August 28, 2024

But it would be helpful if you could update the code so that users don't have to downgrade it anymore

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