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Tom Davidson's Projects

caiman icon caiman

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

chronux icon chronux

A git repository of the Chronux package

dj-nwb icon dj-nwb

Explorations in using NWB with DataJoint

ephys-viz icon ephys-viz

Widgets for visualizing electrophysiology experiments and results of spike sorting

goes-notify icon goes-notify

A script that checks for a better Global Entry enrollment appointment time

jp_proxy_widget icon jp_proxy_widget

Generic Jupyter/IPython widget implementation that will support many types of javascript libraries and interactions.

ml_ephys icon ml_ephys

Electrophysiology tools, mountainlab processor library

mltools icon mltools

Python package for use with MountainLab-js

mountainlab-js icon mountainlab-js

MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting software, but is designed to be much more generally applicable.

mountainsort-legacy icon mountainsort-legacy

This is a fork of magland/mountainsort, which was deleted and superseded by flatironinstitute/mountainsort.

mysql-docker icon mysql-docker

Docker image for mysql configured to work with DataJoint

nb_conda icon nb_conda

unmaintained fork: use this one instead https://github.com/fcollonval/jupyter_conda

nlx2mat-unix icon nlx2mat-unix

Software to import Neuralynx data files into Matlab, ported to Unix by Ueli Rutishauser

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