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zkamvar avatar zkamvar commented on September 16, 2024

What do you get when you run packageDescription("adegenet")?

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thibautjombart avatar thibautjombart commented on September 16, 2024

Hi Christine,
with adegenet 2.0.0 (github version) I get:

> library(adegenet)
Loading required package: ade4
   ==========================
    adegenet 2.0.0 is loaded
   ==========================

 - to start: type '?adegenet'
 - to browse the adegenet website: type 'adegenetWeb()'
 - to post questions/comments: adegenet-forum@lists.r-forge.r-project.org
 - to report bugs, request features, contribute: http://goo.gl/dZuu5X


> data(nancycats)
> sep <- seppop(nancycats)
> repool(sep[[1]], sep[[2]])

   #####################
   ### Genind object ### 
   #####################
- genotypes of individuals - 

S4 class:  genind
@call: repool(sep[[1]], sep[[2]])

@tab:  32 x 64 matrix of genotypes

@ind.names: vector of  32 individual names
@loc.names: vector of  9 locus names
@loc.nall: number of alleles per locus
@loc.fac: locus factor for the  64 columns of @tab
@all.names: list of  9 components yielding allele names for each locus
@ploidy:  2 2 2 2 2 2
@type:  codom
Optional contents: 
@strata: - empty -
@hierarchy:  - empty -
@pop:  factor giving the population of each individual
@pop.names:  character giving the name of each population

@other: - empty -

Can you try with this version?

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thibautjombart avatar thibautjombart commented on September 16, 2024

Yes, it works in the current devel. Closing.

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