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Re-run performance comparison after change
Change is theosanderson/chronumental#17
Treetime comparison
I was re-reading the paper and:
If we assume that TreeTime is perfectly calibrated, then the
maximum value that Chronumental could achieve (oracularly predicting exactly the correct date in every
case) would be 90%, since TreeTime outputs 90% confidence intervals.
on reflection doesn't make sense. Chronumental could exactly re-implement the TreeTime algo and get 100%! Probably the reviewers will flag this but if not fix it anyway.
Investigate timings figure
Currently hitting neherlab/treetime#169 which I don't think I noticed previously, but no change to treetime codebase so probably I was hitting it without noticing and need to fix these timings
Cite TempEst
s/reading up to them/reading up to it/
Use coord_fixed for treetime comparison figure, or at least make the breaks the same
Update manuscript to include "days" in x axis for blinding figure
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