Comments (4)
michalk8
commented on May 19, 2024
Done via #43
from cellrank.
Marius1311
commented on May 19, 2024
Thanks, will check this out as well.
from cellrank.
Marius1311
commented on May 19, 2024
P_1 = np.array([[0.8, 0.1, 0.1], [0.5, 0.0, 0.5], [0.0, 0.1, 0.9]])
cr.pl.graph(data=P_1)gives
--------------------
TypeErrorTraceback (most recent call last)
<ipython-input-129-f4145b11bf6c> in <module>
----> 1 cr.pl.graph(data=P_1)
TypeError: graph() missing 1 required positional argument: 'graph_key'from cellrank.
michalk8
commented on May 19, 2024
Should be fixed on master now.
from cellrank.
Related Issues (20)
- vk has no attribute plot_projection? HOT 7
- vk.plot_projection(): KeyError: "Unable to find a basis in `adata.obsm['X_umap']` or `adata.obsm['umap']`." HOT 2
- Estimating Fate Probabilities and Driver Genes----Uncover driver genes: RuntimeError: No stationary distribution found in `.eigendecomposition['stationary_dist']`. HOT 4
- AttributeError: 'NoneType' object has no attribute 'compute_transition_matrix' HOT 5
- Identify states -> I get ValueError: Sparse implementation is only available for `method='krylov'`. HOT 3
- How to delete gridlines in figures HOT 2
- Request for Intestinal organoid dataset(scEU-seq) HOT 3
- Setting of vk.plot_projection() HOT 2
- ValueError: setting an array element with a sequence HOT 4
- P-value for cellrank.pl.log_odds HOT 2
- Tolerance not exposed HOT 1
- Real Schur Decomposition High Values HOT 2
- Saving figures generated by ScVelo and CellRank HOT 9
- Remove L2 penalty from pygam models HOT 1
- Heatmap expression cascade enriched for genes peaking in most terminal state of the lineage HOT 7
- Fix `pandas>=2.1.1` HOT 1
- Using Seurat SNN graph in place of connectivities matrix HOT 2
- A question about cr.pl.gene_trends() of cellrank HOT 17
- A question about g.predict_terminal_states(method="top_n", n_states=6) and g.plot_macrostates(which="terminal") HOT 1
- Saving vk.plot_projection() HOT 3
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from cellrank.