Comments (3)
Hi @aragorn67, thanks for reporting this. When we run the command you ran (python main.py --model_path .\models\e_coli_core_rounded.xml
) on a freshly installed Windows machine, it completes without errors:
Enumerated 739 rays
Found 732 ECMs
Ran in 15.415319 seconds
Something you can check to debug this:
- Try downloading ecmtool to a local folder instead of your OneDrive. If that fixes the problem, ask your administrators to allow execution permissions on OneDrive, as ecmtool runs programs from there.
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Thank you that was the problem!
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Glad to hear! We'd love to hear more from you if ecmtool proves useful to your work 👍
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Related Issues (12)
- Negative "possible adjacencies" printed
- ECMs without biomass, remove_infeasible_irreversible_reactions bug HOT 6
- Error with network.compress() HOT 8
- sympy version check in cbmpy pckg HOT 2
- GLPK is not recognized HOT 5
- File missing HOT 2
- ECM results missing key metabolism or biomass synthesis HOT 3
- lrslib on CentOS 7 HOT 3
- Solution differences between Windows vs linux (centOS 7) HOT 7
- `get_conversion_cone()` function missing HOT 4
- polco leads to 0 ecms with `e_coli_core`
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