This workshop assumes that there exists a folder named data
immediately
above this repository folder. Within the data
folder there should be two
main data files: scFFPE_raw.h5ad and xenium_rep1.h5ad. These can be
downloaded from the following links:
https://www.huber.embl.de/users/harald/embo/scFFPE_raw.h5ad
https://www.huber.embl.de/users/harald/embo/xenium_rep1.h5ad
With thanks to Harald Vohringer for preparing the processed data objects. Contact: Shila Ghazanfar [email protected]