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scibot's Introduction

SciBot

Data Science Fall 2017 project to perform data processing, cleaning, and analysis on Data Science Papers

All output files are stored in the data folder Initial .txt files about the text are stored in the microsoft folder Complete text is stored in the text folder dependencies.sh installs all necessary python libraries in order to run our code

Data Integration and Cleaning:

python task1.py

Produces CSV with PID,PDFID,title,conf,folder,year,affil,authors,author_ids,keywords

Reads from: microsoft/Authors.txt, microsoft/PaperAuthorAffiliations.txt, microsoft/PaperKeywords.txt, microsoft/index.txt, microsoft/Papers.txt
Writes to: integrated.csv (stores the cleaned index.txt)

Keyword Extraction:

python keywords.py
python task2.py
	
Output:

	Collecting words from documents...
	Calculating support for each word...
	Finding Bigrams...
	Counting Bigrams...
	Finding Transactions...
	Preforming Apriori...
	Number of patterns: 34865
	
	Building non-single itemsets with FP-Growth...
	Number of patterns: 30902
	Done.

task2.py...
Reads from: microsoft/index.txt, text/*, microsoft/Papers.txt
Writes to: data/phrase2count.txt (each entity candidate & its count), data/paper2attributes.txt (contains paper id and entity names found in it), data/paper2attributes2label.txt (attributes, paper id, and name of conference)

Entity Typing:

python task3.py
(must run task 2 before task 3 in order to generate phrase2count.txt)

Reads from: microsoft/index.txt, text/*, data/phrase2count.txt
Writes to: data/entitytyping.txt (classification of each entity), 

Collaboration Discovery:

python task4.py

Reads from: microsoft/Authors.txt, microsoft/PaperAuthorAffiliations.txt, 
Writes to: data/authorcollaborations.txt (Authors collaborations, support)

Problem-Method Association Mining:

python task5.py

Reads from: microsoft/PaperKeywords.txt, microsoft/stopwords.txt, text/*, 
Writes to: data/our_keywords.txt (keywords we found using the ResponseBot functions), data/keyword_bigrams.txt (bigrams from our keywords), data/keyword_counts.txt (contains results of non-single itemsets), data/onetomany.txt (contains one-to-many association rules)

Problem/Method/Author-to-Conference Association:

python task6.py
** task 2 must be run before this task in order to create necessary files **

Reads from: data/paper2attributes2label.txt, 
Writes to: data/bestattributes.txt (top entitites)

Paper Clustering:

python task7.py

Reads from: text/*
Writes to:

Data Visualization:

python word_cloud_viz.py

Reads from: data/entitytyping.txt
Writes to: wordcloud.png

scibot's People

Contributors

bushong12 avatar cbadart avatar

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