Single-subject data for the Spine Generic project
License: Creative Commons Attribution 4.0 International
This repository includes the documentation and the processing scripts for the spine-generic project.
User documentation: https://spine-generic.rtfd.io
Developer documentation: https://github.com/spine-generic/spine-generic/wiki
Repeat spine-generic/data-multi-subject_DO-NOT-USE#20 for this dataset.
version: r20200826
Wrong placement:
I want to use one of your data file but the size of the downloaded data is about 200 KB , not 1 GB
(I followed the description for downloading with git-annex)
We should centralize git-annex doc for both datasets. This could go under a new repos, or under spine-generic RTD.
sub-perform_dwi_dwi_mean.nii.gz --> to exclude
sub-tokyo750w --> slight fat aliasing causing abnormally high FA
I have downloading the Dataset using this code
git clone https://github.com/spine-generic/data-single-subject && \ cd data-single-subject && \ git annex init && \ git annex get
A new folder data-single-subject was created with all zipped files.
However, when downloading the folder, an error is generated sayin that the archive is either in unknown format or damaged.
Please, how could I download the data on my local machine ?
Thanks for your great effort
I found following processing issues in r20200826 release.
GM to correct:
sub-juntendoAchieva_T2star_rms.nii.gz
sub-perform_T2star_rms.nii.gz
sub-glen_T2star_rms.nii.gz
sub-tokyoSkyra_T2star_rms.nii.gz
sub-unf_T2star_rms.nii.gz
An old copy is still at https://github.com/OpenNeuroDatasets/ds002900/, despite being wiped from https://openneuro.org:
This task is to follow up with OpenNeuroOrg/openneuro#2484 until they delete it.
sub-tokyoSigna1_acq-MTon_MTS
Whole sub-glen raw DWI data looks atypically - i.) the 1st volume (should be b0) looks similar as b=800 volumes, ii.) one slice in almost all volumes looks like be acquired without diff. weighting:
Estimated FA then does not make sense:
I would exclude sub-glen from DWI analysis.
A new release of results was published here: https://github.com/spine-generic/data-single-subject/releases/tag/r20200714
It contains a few issues (e.g. inconsistent values, etc.) that will be listed here for the record.
MTS scans should be follow the specs as in the dataset - qmri_mtsat: https://github.com/bids-standard/bids-examples/tree/master/qmri_mtsat/sub-01/anat
acq-MTon_MTS → flip-1_mt-on_MTS
acq-MToff_MTS → flip-1_mt-off_MTS
acq-T1w_MTS → flip-2_mt-off_MTS
Maybe it's a good idea to have the md5 hash of the source file with the release in order to check if the users have the complete zip file. Not sure if GH already offers this feature.
Same as spine-generic/data-multi-subject#102, but more obvious in this dataset:
every scan here is the same subject, so according to BIDS, should be arranged like this:
.
└── sub-01
└── sub-01_sessions.tsv
├── ses-chiba750/
├── ses-chibaIngenia/
├── ses-douglas/
├── ses-glen/
├── ses-juntendo750w/
└── ses-juntendoAchieva/
....
The fields in participants.tsv should be split up so that the constants are in participants.tsv which should only have a single row, and the ones that change per site/scanner are in sub-01_sessions.tsv
This is due to the fact that the script is checking all git annex files *.nii.gz
Hi,
I followed the instructions and when I attempted to download the following example
git annex get sub-douglas sub-juntendoPrisma/anat/
I got this error:
get sub-douglas/anat/sub-douglas_T1w.nii.gz (from amazon...)HttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190912Z")]
path = "/SHA256E-s15150355--b8c3c6fcb51c1aa572fa457022519899b54e1bf822548df802ec7c77b08ad02b.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","QES26SY901C4DA1H"),("x-amz-id-2","fprQYbyeGXrOwMM+Dv00tEENQVUoXFrkpy2DwqHIu8DPAFWoDuegVMN0rKiVqEQmsrP+iaWDF3Q="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190912Z")]
path = "/SHA256E-s15150355--b8c3c6fcb51c1aa572fa457022519899b54e1bf822548df802ec7c77b08ad02b.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP91QES26SY901C4DA1HfprQYbyeGXrOwMM+Dv00tEENQVUoXFrkpy2DwqHIu8DPAFWoDuegVMN0rKiVqEQmsrP+iaWDF3Q=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) nat/sub-douglas_T2star.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190912Z")]
path = "/SHA256E-s2976744--36dfd813a650a88e427820231a38bd32b5369e569d87ad8f73f22bf35967d288.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47KEDSBT8R4GKFXT"),("x-amz-id-2","K0PEAnKyWaiKf/ueXqPuMEKTMwETrkMv8LSEvMXalwHVUwEUwG+xGH0VG9fVtg6m9AkQLHoSK3g="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190912Z")]
path = "/SHA256E-s2976744--36dfd813a650a88e427820231a38bd32b5369e569d87ad8f73f22bf35967d288.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147KEDSBT8R4GKFXTK0PEAnKyWaiKf/ueXqPuMEKTMwETrkMv8LSEvMXalwHVUwEUwG+xGH0VG9fVtg6m9AkQLHoSK3g=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) nat/sub-douglas_T2w.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s7194841--2480dff8f36533a702782135b652c6a40d5e68741350d8470eb0742ad4830dc4.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47K132DQ8X0H1XKG"),("x-amz-id-2","hw/PoT4Ggs9TZlM2+5VILykwZD8gwF5aPZTy+Ayc29s0HuYWRmzldQ24JDSzbTm8oolS8El0ERo="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s7194841--2480dff8f36533a702782135b652c6a40d5e68741350d8470eb0742ad4830dc4.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147K132DQ8X0H1XKGhw/PoT4Ggs9TZlM2+5VILykwZD8gwF5aPZTy+Ayc29s0HuYWRmzldQ24JDSzbTm8oolS8El0ERo=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) wi/sub-douglas_dwi.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s8843523--be93765d6aec7521ee7f9f62c6a62989de4dd74cdba9bbcac4f8fcfcd73a975f.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47KCCEBGMKXY8ATE"),("x-amz-id-2","C4thnV6RxT/pAMup3vI5qiz60mYpo8CaeWaqfUZtsXFX7afqOKWCumAeB8kbJW7cHTp/yQOSGX4="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:12 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s8843523--be93765d6aec7521ee7f9f62c6a62989de4dd74cdba9bbcac4f8fcfcd73a975f.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147KCCEBGMKXY8ATEC4thnV6RxT/pAMup3vI5qiz60mYpo8CaeWaqfUZtsXFX7afqOKWCumAeB8kbJW7cHTp/yQOSGX4=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) risma/anat/sub-juntendoPrisma_T1w.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s15620184--f94149fad929cec9c004485b4204369319a438a97fc669426402d747f81fc748.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47K5H1A0A443D0ZP"),("x-amz-id-2","Pwg4olm+KxbfixClkS/o/3YU25+IN+qLkZsGgjItdWJhlCiEQ37x2ljH0Q9MrJkSMLv52ffVB/w="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s15620184--f94149fad929cec9c004485b4204369319a438a97fc669426402d747f81fc748.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147K5H1A0A443D0ZPPwg4olm+KxbfixClkS/o/3YU25+IN+qLkZsGgjItdWJhlCiEQ37x2ljH0Q9MrJkSMLv52ffVB/w=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) risma/anat/sub-juntendoPrisma_T2star.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s2320143--a6e785abf7a70c4b2d0d5a8e46cdff2d97feaffe9caf5706b6bbab208de9aba0.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47K539PZEF1YSHB5"),("x-amz-id-2","38Ke/K6TooqJUP3oawQHnLlLvc7ASo9Buzt4Q8gueGL1VtzXhHz5UALCcqPzz/H7I7CA+vfNcaQ="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s2320143--a6e785abf7a70c4b2d0d5a8e46cdff2d97feaffe9caf5706b6bbab208de9aba0.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147K539PZEF1YSHB538Ke/K6TooqJUP3oawQHnLlLvc7ASo9Buzt4Q8gueGL1VtzXhHz5UALCcqPzz/H7I7CA+vfNcaQ=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) risma/anat/sub-juntendoPrisma_T2w.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s10980709--8e7ea05115d986a54cefd18d5909c5c1203264d6089093aefdbb7a3921580cb8.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47KEDNKDB36B494J"),("x-amz-id-2","qO1KEa8pvu66LpwO5wnKfAbp/Q2bnL/35uwNcgSRikNKIx6mBV73L+TXG0ImGEoQwL4JoWg/UF8="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s10980709--8e7ea05115d986a54cefd18d5909c5c1203264d6089093aefdbb7a3921580cb8.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147KEDNKDB36B494JqO1KEa8pvu66LpwO5wnKfAbp/Q2bnL/35uwNcgSRikNKIx6mBV73L+TXG0ImGEoQwL4JoWg/UF8=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) risma/anat/sub-juntendoPrisma_acq-MToff_MTS.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s1744995--689bd9bb119372e541176a39a448c2da8c7a023f15f65893442c2ccbfc315d0d.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47K70YEWYAJ42YBH"),("x-amz-id-2","5bAFBKUizf7gUfLRgUn2OcdGDnij8HtxQZynPPUgJOzfl2kIiGwu8IUb0hCW6EIiVxWb/IfpoWU="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s1744995--689bd9bb119372e541176a39a448c2da8c7a023f15f65893442c2ccbfc315d0d.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147K70YEWYAJ42YBH5bAFBKUizf7gUfLRgUn2OcdGDnij8HtxQZynPPUgJOzfl2kIiGwu8IUb0hCW6EIiVxWb/IfpoWU=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) risma/anat/sub-juntendoPrisma_acq-MTon_MTS.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s1712449--7d70996bf94130244a3705938b591cd14e6e57fe3be4a75f9ab0e6181fba44f2.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","47K9DVRNYQDK81SZ"),("x-amz-id-2","1TTo0E71ru2+JqI9Ct1UyqspmCifh3W1aeCLCZLiTX/SwZdtUOZvRON1+8zC8QM2M05r4+9DJe4="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s1712449--7d70996bf94130244a3705938b591cd14e6e57fe3be4a75f9ab0e6181fba44f2.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP9147K9DVRNYQDK81SZ1TTo0E71ru2+JqI9Ct1UyqspmCifh3W1aeCLCZLiTX/SwZdtUOZvRON1+8zC8QM2M05r4+9DJe4=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject(Note that these git remotes have annex-ignore set: origin)
failed
(from amazon...) risma/anat/sub-juntendoPrisma_acq-T1w_MTS.nii.gzHttpExceptionRequest Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s1759011--dd42761f11f5d747ea7f4cf77b512727dbf049f17cd2e15782281209420d6ca4.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
(StatusCodeException (Response {responseStatus = Status {statusCode = 403, statusMessage = "Forbidden"}, responseVersion = HTTP/1.1, responseHeaders = [("x-amz-request-id","N88BXCK310V416Y9"),("x-amz-id-2","sI24f3YDuh5MtkfczH+QkkfjiWLE8pytuZ+TWhki0jv3AIgzbQp4mATPjm9zRxAcOltjfB5RPKI="),("Content-Type","application/xml"),("Transfer-Encoding","chunked"),("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Server","AmazonS3")], responseBody = (), responseCookieJar = CJ {expose = []}, responseClose' = ResponseClose, responseOriginalRequest = Request {
host = "data-single-subject---spine-generic---neuropoly.s3.ca-central-1.amazonaws.com"
port = 443
secure = True
requestHeaders = [("Date","Thu, 14 Jul 2022 19:09:13 GMT"),("Authorization",""),("X-Amz-Content-Sha256","e3b0c44298fc1c149afbf4c8996fb92427ae41e4649b934ca495991b7852b855"),("X-Amz-Date","20220714T190913Z")]
path = "/SHA256E-s1759011--dd42761f11f5d747ea7f4cf77b512727dbf049f17cd2e15782281209420d6ca4.nii.gz"
queryString = ""
method = "GET"
proxy = Nothing
rawBody = False
redirectCount = 10
responseTimeout = ResponseTimeoutDefault
requestVersion = HTTP/1.1
proxySecureMode = ProxySecureWithConnect
}
}) "\nInvalidAccessKeyIdThe AWS Access Key Id you provided does not exist in our records.08TJMT99S3511WOZEP91N88BXCK310V416Y9sI24f3YDuh5MtkfczH+QkkfjiWLE8pytuZ+TWhki0jv3AIgzbQp4mATPjm9zRxAcOltjfB5RPKI=")Unable to access these remotes: amazon
Maybe add some of these git remotes (git remote add ...):
5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject
(Note that these git remotes have annex-ignore set: origin)
failed
get: 10 failed
And when I add git remote add 5ca3a9a5-ac75-410e-8dcd-8a24463f08fa -- [email protected]:~/code/spine-generic/data-single-subject command and try again, nothing is happening for a long time and I have to kill the process.
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