slicer / landmarkregistration Goto Github PK

The module became broken as a result of chnages to the Slicer Markups module and needs to be ported. This has led to some confusion (e.g. https://discourse.slicer.org/t/how-to-load-landmarks/10127/11) so it should be disabled until there is time to fix it.

See also:
https://issues.slicer.org/view.php?id=2579
https://issues.slicer.org/view.php?id=3582
https://issues.slicer.org/view.php?id=3553

When two volumes are very misaligned then setting the position of the dropped fiducial on the other image (where it was placed automatically) is almost impossible.

There should be an option to drop markups separately on the fixed and moving volumes.

See https://issues.slicer.org/view.php?id=3643

A duplicate landmark is showing up when setting the first landmark (using Slicer 4.10.2). This behaviour though only shows up when the user unchecks the "Transformed" view before adding the first landmark.

So to reproduce, do the following:

1. Load two volumes
2. Select the Landmark Registration module
3. Set fixed and moving volume
4. Uncheck the "Transformed" checkbox in Display
5. Add a first landmark
6. Set the corresponding landmark
7. Try to move the first added landmark in the slice view --> A second landmark with same name shows up

It seems to be a minor bug as the registration anyways works as expected. The second landmark with same label though might confuse the user.

http://trunk.cdash.org/testDetails.php?test=6148611&build=407511

test_widgetRepresentation (qSlicerLandmarkRegistrationModuleGenericTest.qSlicerLandmarkRegistrationModuleGenericTest) ... Traceback (most recent call last):
  File "/Users/kitware/Dashboards/Continuous/Slicer-0-build/Slicer-build/lib/Slicer-4.4/qt-scripted-modules/LandmarkRegistration.py", line 63, in __init__
    self.logic = LandmarkRegistrationLogic()
  File "/Users/kitware/Dashboards/Continuous/Slicer-0-build/Slicer-build/lib/Slicer-4.4/qt-scripted-modules/LandmarkRegistration.py", line 698, in __init__
    self.cropLogic = slicer.modules.cropvolume.logic()
AttributeError: 'module' object has no attribute 'cropvolume'

Use something like a cli module to run registration in a local area around the location of the fiducial.