Higun is not picking up MiSeq runs that are actually OK and/or finished (i.e 140124_M01320_0070_000000000-A71KL). The reason is that the method hugin.run_monitor.get_status_due (here) is first looking for the status file First_Base_Report.htm, which Is not being generated for the MiSeq (I'm not sure about the last statement.). @b97pla can you confirm this?

This could be solvable by doing a different checking for the MiSeq runs.

Don't worry @senthil10 , you have more or less one year to solve this, haha

If I'm not wrong, the problem is in trello_utils.change_list. That function is returning True even if the card doesn't really have changed the list.

The problem may be around here, where boards and lists are being compared. Not sure about this.

For Mi-seq runs usually the samplesheets are not like in the same format of hiseq. But illumina_finished_msg creates a second samplesheet in hiseq format. But sometimes these samplesheet are not present in the run folder and hence the run is skipped by hugin.

For example, due dates for RapidHighOutput and X-Ten runs

Currently, changing the zoom setting usually causes you to lose your view in the image.

It would be more intuitive and cause less scrolling and searching if the middle pixel of the new zoom's view was the same as the current zoom's.

It is creating some weird bullet points in the card description, i.e

EDIT:

For example, bullet point 1 has repeated information from bullet point 5. Also the second bullet point contains what I guess is the nas number? don't know

• Source NAS
• Machine IP
• Where the run is being demultiplexed (processing server)

Hi,

There is this condition in the function update_tello_board in the run_monitor.py module:

# If due time has passed, set status to stalled
if due < datetime.datetime.utcnow():
    status = STALLED

If a run fails once, and the time between the re-starting of this run and the time when it completes passes the due date, it will never be moved from check_status, because this conditional will always be true.

Is happening right now with some Miseq runs that we had to re-start. They finished ok, but they're not being moved from check_status because due date is July 19th