Comments (1)
Hi Greg! Thanks for the nice suggestions. I have added the ID of each annotation in the ID column of the VCF. Also, when all chromosomes have integer ids, then they would be sorted numerically as well.
Best
M
from syri.
Related Issues (20)
- ERROR - No syntenic region found for chromosome: chr15. This is potentially caused by the two assemblies having different strands for this chromosomes. Reverse complement the chromosome to ensure that the same strands are analysed. Exiting HOT 1
- Syri doesn't deal with unequal chromosome comparison HOT 2
- IndexError: list index out of range(direction) HOT 6
- chroder input format requirements HOT 2
- ImportError: libicui18n.so.56: cannot open shared object file: No such file or directory HOT 2
- Sequence length calculation error HOT 6
- translocation ascross chromosomes HOT 1
- Can't install on Ubuntu 22.04 HOT 2
- How to cite chroder? HOT 1
- error running syri: IndexError: list index out of range HOT 2
- How to identify breakpoint of large inversion HOT 3
- Aligning bacterial genomes with different number of contigs HOT 2
- longer processing time for large genome? HOT 1
- nearly identical HDRs HOT 3
- How long does it take to generate the result file? HOT 3
- conda installation HOT 2
- Removes 'low-quality alignments' - what does this mean? HOT 1
- complicated region not detected correctly HOT 2
- About InvOut and Inv breakpoints HOT 3
- Huge chromosome problem HOT 6
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