Comments (3)
Check this: #54
In addition to that, NOTALs can also be affected by filtering of alignments having low alignment identity by syri. You can toggle the -f
parameter to disallow alignment filtering.
from syri.
thank you for your response.
While calculating total genome specific sequences, should we consider only NOTAL sequences or any other category of the sequences?
from syri.
Genome specific sequences should include NOTALs and INDELs. They can also include HDRs but that would depend on your downstream analysis.
from syri.
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from syri.