schaudge Goto Github PK
Name: Schaudge
Type: User
Bio: MathInforBioist
Location: Shanghai, PRC
Name: Schaudge
Type: User
Bio: MathInforBioist
Location: Shanghai, PRC
Tools and methods for analysis of single cell assay data in R
Minimum plain text representation of kmer sets
Ultra-fast and memory-efficient (meta-)genome assembler
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.
MEGAN Community Edition
Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data
:comet: Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments
Proof-of-concept seq-to-graph mapper and graph generator
MiniJinja is a powerful but minimal dependency template engine for Rust
A versatile pairwise aligner for genomic and spliced nucleotide sequences
MITIE: library and tools for information extraction
mlpack: a scalable C++ machine learning library
MMseqs2: ultra fast and sensitive search and clustering suite
Models and examples built with TensorFlow
📚 Modern C++ Tutorial: C++11/14/17/20 On the Fly | https://changkun.de/modern-cpp/
The MongoDB Database
MONI: A Pangenomic Index for Finding MEMs
an analysis toolkit for single-cell RNA-Seq experiments
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Welcome to the mothur project, initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology & Immunology at The University of Michigan. This project seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community.
Scalable Nucleotide Alignment Program -- a fast and accurate read aligner for high-throughput sequencing data
Aggregate results from bioinformatics analyses across many samples into a single report.
Mummer alignment tool
Multiple sequence alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and predicted structures.
Multi-subject Single Cell Deconvolution
Linear algebra library for Rust.
Optimized primitives for collective multi-GPU communication
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.