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fp4s

Fun working examples of FP in Scala based on different talks

framework

Lift Framework

free-arrow

Implementation of the Free Arrow in Scala and other helpful tools for working with Arrows

fs2

Compositional, streaming I/O library for Scala

fs2-example

Getting started fs2

fs2-helper

Simple fs2 helper for testing out the library in ammonite

fs2-http

Http Server and client using fs2

fs2poc

fs2POC

fully-differentiable-deep-ndf-tf

Fully differentiable deep-neural decision forest in tensorflow

functional-data-modeling

The exercises for the Functional Data Modeling workshop.

functional-scala

The repository for the Functional Scala workshop.

future

High-performance Future implementation for the JVM

gatk

Official code repository for GATK versions 4 and up

genomed3plot

SVG based genome viewer written in javascript using D3

gephi

trunk

gephi-toolkit-forceatlas2-standalone

Standalone JAR for Forceatlas2 layout from Gephi Toolkit

gridss

GRIDSS: the Genomic Rearrangement IDentification Software Suite

guix-additions

hail

Scalable genomic data analysis.

happyweb

Trying out scalajs-bundler and webpack

haskell-nix

Nix and Haskell in production

helm2json

Turn Helm chart into single - helm values respecting - k8s compatible json with Nix

homies

linux package management

htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

icicle

A streaming query language.

igv.js

Embeddable genomic visualization component based on the Integrative Genomics Viewer

ilearndeeplearning.py

This repository contains small projects related to Neural Networks and Deep Learning in general. Subjects are closely linekd with articles I publish on Medium. I encourage you both to read as well as to check how the code works in the action.

infrastructure-as-types

Infrastructure as Types - modern infrastructure declaration and deployment toolkit

intro-shapeless

io4s

Small scala library for simple IO handling. PRs are welcome