Name: Rafael Puche
Type: User
Company: Venezuelan Scientific Research Institute (IVIC)
Bio: Biologist/Bioinformatician at IVIC (Venezuela) and Bioinformatics Master student at UdelaR (Uruguay)
Twitter: rpucheq
Location: Venezuela
Blog: @rpucheq
fast_progress
Simple and flexible progress bar for Jupyter Notebook and console
fastani
Fast Whole-Genome Similarity (ANI) Estimation
fastmlst
⚡️🧬 FastMLST: A multi-core tool for multilocus sequence typing of draft genome assemblies
findmyfriends
Fast alignment-free pangenome creation and exploration
genomicspapers
The Leek group guide to genomics papers
getena
A simple Python Script to Download a Whole ENA Project
gggenomes
A grammar of graphics for comparative genomics
ggplot_flipbook
This is a flipbook that builds up plots with ggplot2.
grupo-de-trabajo-interdisciplinario-en-bioinformatica-biologia-computacional-y-ciencia-de-datos
Descripcion General del Grupo de Trabajo en Bioinformatica y Ciencia de Datos
install
:inbox_tray: Homebrew (un)installer
intro2phyloinfo
Material didáctico para el taller de introducción a la filoinformática: pan-genómica y filogenómica
iqtree2
NEW location of IQ-TREE software for efficient phylogenomic software by maximum likelihood http://www.iqtree.org
jellyfish
A fast multi-threaded k-mer counter
kraken
Kraken taxonomic sequence classification system
learning-bioinformatics-at-home
resources for learning bioinformatics
learning_bam_file
Learning the Sequence Alignment/Map format
lightassembler
Lightweight resources assembly algorithm
mac
Merging assemblies by using adjacency algebraic model and classification
machine-learning-with-r-datasets
Formatted datasets for Machine Learning With R by Brett Lantz
machine_learning_r_cap8
Seminario donde se explica el capitulo 8 del libro Machine Learning with R, en el cual se habla del Market Basquet Analysis, usando datos de una tienda de alimentos.
machine_learning_rafael
Repo para los scripts del curso de Machine Learning
magpy
Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)
megahit
MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
metacoder
Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
minimal-mistakes
:triangular_ruler: A flexible two-column Jekyll theme perfect for building personal sites, blogs, and portfolios.
mlstar
An easy way of MLSTyping your genomes in R.
moderndive_book
Statistical Inference via Data Science: A moderndive into R and the tidyverse
nature_bash
Example scripts demonstrating science at the command line.
ncov
Template directory for SARS-CoV-2 phylogenetics analyses using nextstrain
ngs-in-bioc
A course on Analysing Next Generation (/High Throughput etc..) Sequencing data using Bioconductor
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
