rmcminds Goto Github PK

202206_mammallometry

blca

cophylogeny_simulations

dekupl-run

Identify differentially expressed k-mers between RNA-Seq datasets

entrez_qiime

A utility to generate input files for taxonomy assignment in QIIME from the NCBI database

gcmp

GCMP data analysis

gcmp_stan_symportal

full workflow for analysis of GCMP Symbiodiniaceae data

inat_recent_rare

probably Shiny app that retrieves user records or bounding box records and finds recent unusual observations. would like to someday create model based predictions for how unusual something is (training something with cycles and an intercept - maybe leave out linear trend?)

inatle

iNaturalist guessing game pulling from recent local observations

mares_database_pipeline

mcminds_et_al_2022

Code used to analyze data and produce figures for McMinds et al 2022

merdemicrobes

Personal webpage merdemicrobes.org source

metagenomics_workshop

for sharing/developing metagenomics workshop code

newwave

NewWave

rmcminds.github.io

sc_mixology

This contains the dataset for comparing scRNA-seq analysis methods

stan_models

collection of models written in Stan, with data wrangling code to run the models on real data

symportal_framework

Welcome to the SymPortal GitHub repository. SymPortal is an analytical tool used to identify Symbiodiniaceae spp. taxa using Illumina rDNA ITS2 amplicon NGS data.

tara_pacific_in_situ_photos

thecnidaegritty

Lab webpage thecnidaegritty.org source

zinbwave_phylo

Clone of the Bioconductor repository for the zinbwave package, see https://bioconductor.org/packages/zinbwave