Comments (4)
Hi @nsoranzo thanks for the feedback! Implementing releases per standard github conventions is on my to-do list, but it will probably be a while before I get to it as I'm working on extensive improvements to the algorithm. It's premature to update muscle in widely-used distributions such as Debian and Bioconda, this should be regarded as an experimental/beta release which has yet been widely tested in practice.
from muscle.
OK, thanks for the reply! I'll mark the Bioconda update as Work In Progress for the time being.
from muscle.
Just saw your online talk about MUSCLE v5, and came to check if it was shipping on Bioconda! π¦ π
For what it's worth, the bioRxiv preprint has already been cited, and you could tag a release candidate as v5.0.1428-rc.1
to show it's still in beta.
from muscle.
v5.0.1428 is out, closing.
from muscle.
Related Issues (20)
- Resampling Clarification HOT 5
- Can muscle be made to take two or more non-file cli arguments (input streams)? [v3.8] HOT 1
- Memory Object >4Gb error HOT 6
- gap penlty HOT 2
- @ in output filename required for -perm all with -super5 HOT 1
- Memory Object Too Large due to very long sequences HOT 2
- Automatic optimal number of threads HOT 2
- If is possible to release Muscle V5 version which has no dependence of omp.h? HOT 8
- Specifying threads HOT 4
- usorter.cpp(88) assert failed: L >= m_WordLength HOT 2
- Segmentation fault (core dumped)riors HOT 2
- Segmentation fault : only a few small sequences to align HOT 1
- alignment error when short sequence HOT 5
- Running time for large numbers of sequences
- python version of the codeοΌ HOT 1
- Fatal error: allocflat.cpp(15) assert failed: uint64(Size) == Size64 HOT 1
- segmentation fault muscle -align testing.fa -output alignment.afa HOT 3
- Error in `muscle': free(): invalid next size (normal): 0x00002b09305f4a40 ***
- How can I download v5 muscle? HOT 5
- 2 nts are "cut" from the rest. HOT 2
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from muscle.