Comments (5)
readthedocs supports conda config files, which is a bit tricky for this project, as it should preferably use the master branch of dolfin, which is not on conda-forge.
With jupyter-book, we would use the github actions to publish the package, and would therefore be able to use any docker image, for instance: docker pull ghcr.io/scientificcomputing/fenics:2023-01-16
which is FEniCS master branch built on Ubuntu 22.04 two days ago.
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I think moving away from readthedocs would be best. By using github pages we have more control over the environment. The only downside as I can see is that we lose versioning of the pages, i.e that you can have different pages for different versions of the software, but I don't think this is relevant it our case.
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We've transitioned to Github Actions and pages for other projects in the lab. See Mem3DG as an example. We also added some first pass attempts to deploy documentation for multiple versions of docs. Only challenge is ensuring that fetched libraries and outgoing links remain live.
https://github.com/RangamaniLabUCSD/Mem3DG/blob/master/.github/workflows/doc_versioning.yaml
https://rangamanilabucsd.github.io/Mem3DG/
from smart.
We've transitioned to Github Actions and pages for other projects in the lab. See Mem3DG as an example. We also added some first pass attempts to deploy documentation for multiple versions of docs. Only challenge is ensuring that fetched libraries and outgoing links remain live.
https://github.com/RangamaniLabUCSD/Mem3DG/blob/master/.github/workflows/doc_versioning.yaml https://rangamanilabucsd.github.io/Mem3DG/
For now I'm not sure having multiple versions of the documentation should be a priority. Eventually, we could do this through jupyter-book and readthedocs
once we have a conda package for the latest dolfin commit.
The most important thing now is to have something on the documentation at all. The current webpage: https://stubs.readthedocs.io/en/development/ does not have any info on it, does not build, and the API does currently not show due to the aforementioned conda issues.
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For now I'm not sure having multiple versions of the documentation should be a priority. Eventually, we could do this through jupyter-book and readthedocs once we have a conda package for the latest dolfin commit.
Multiple versions of docs is low priority. We could consider it more if there are major API changes between versions or when there are manuscripts with code published. Folks can always build their own docs from an archived version of a package.
The most important thing now is to have something on the documentation at all. The current webpage: https://stubs.readthedocs.io/en/development/ does not have any info on it, does not build, and the API does currently not show due to the aforementioned conda issues.
I agree.
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Related Issues (20)
- Create and publish docker image
- Add logging based on the python `logging` module HOT 5
- Rename STUBS HOT 1
- Usage of MixedAssemblerTemp.* HOT 2
- Enable use of MPI to run multiple simulations in parallel HOT 3
- Bugs for use of MPI to parallelize mesh in SMART HOT 2
- Handle warning from pandas
- Logging of tables HOT 2
- `filler_char` in logs HOT 1
- [JOSS Review] Installation HOT 1
- [JOSS Review] Reproducibility and functionality HOT 2
- [JOSS Review] Tests
- [JOSS Review] Documentation
- [JOSS REVIEW] Struggling with docker installation HOT 4
- [JOSS REVIEW] adding pytest-cov to the docker image HOT 1
- Remove the `print_assembly` option from Smart in its entirety. HOT 1
- Webpage execution of Example 2
- Mass conservation violation due to incorrect integrals using MeshViews
- NaN returned by solver for certain axisymmetric test cases
- Implement type checking via mypy (or similar)
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